ESTs from a wild Arachis species for gene discovery and marker development

Registro completo de metadados
MetadadosDescriçãoIdioma
Autor(es): dc.creatorProite, Karina-
Autor(es): dc.creatorBertioli, Soraya Cristina de Macedo Leal-
Autor(es): dc.creatorBertioli, David John-
Autor(es): dc.creatorMoretzsohn, Márcio de Carvalho-
Autor(es): dc.creatorSilva, Felipe Rodrigues da-
Autor(es): dc.creatorMartins, Natália Florêncio-
Autor(es): dc.creatorGuimarães, Patrícia Messenberg-
Data de aceite: dc.date.accessioned2021-10-14T17:24:36Z-
Data de disponibilização: dc.date.available2021-10-14T17:24:36Z-
Data de envio: dc.date.issued2017-08-22-
Data de envio: dc.date.issued2017-08-22-
Data de envio: dc.date.issued2007-02-15-
Fonte completa do material: dc.identifierhttp://repositorio.unb.br/handle/10482/24206-
Fonte completa do material: dc.identifierhttps://dx.doi.org/10.1186/1471-2229-7-7-
Fonte: dc.identifier.urihttp://educapes.capes.gov.br/handle/capes/607224-
Descrição: dc.descriptionBackground: Due to its origin, peanut has a very narrow genetic background. Wild relatives can be a source of genetic variability for cultivated peanut. In this study, the transcriptome of the wild species Arachis stenosperma accession V10309 was analyzed. Results: ESTs were produced from four cDNA libraries of RNAs extracted from leaves and roots of A. stenosperma. Randomly selected cDNA clones were sequenced to generate 8,785 ESTs, of which 6,264 (71.3%) had high quality, with 3,500 clusters: 963 contigs and 2537 singlets. Only 55.9% matched homologous sequences of known genes. ESTs were classified into 23 different categories according to putative protein functions. Numerous sequences related to disease resistance, drought tolerance and human health were identified. Two hundred and six microsatellites were found and markers have been developed for 188 of these. The microsatellite profile was analyzed and compared to other transcribed and genomic sequence data. Conclusion: This is, to date, the first report on the analysis of transcriptome of a wild relative of peanut. The ESTs produced in this study are a valuable resource for gene discovery, the characterization of new wild alleles, and for marker development. The ESTs were released in the [GenBank:EH041934 to EH048197].-
Formato: dc.formatapplication/pdf-
Publicador: dc.publisherBioMed Central-
Direitos: dc.rightsAcesso Aberto-
Direitos: dc.rights© 2007 Proite et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.-
Palavras-chave: dc.subjectAmendoim - cultivo-
Palavras-chave: dc.subjectDiversidade genética-
Palavras-chave: dc.subjectProteínas-
Título: dc.titleESTs from a wild Arachis species for gene discovery and marker development-
Tipo de arquivo: dc.typelivro digital-
Aparece nas coleções:Repositório Institucional – UNB

Não existem arquivos associados a este item.