UCE phylogenomics, biogeography, and classification of long-horned bees (Hymenoptera: Apidae: Eucerini), with insights on using specimens with extremely degraded DNA

Registro completo de metadados
MetadadosDescriçãoIdioma
Autor(es): dc.contributorUniversidade de São Paulo (USP)-
Autor(es): dc.contributorUtah State University-
Autor(es): dc.contributorUniversidade Estadual Paulista (UNESP)-
Autor(es): dc.contributorWashington State University-
Autor(es): dc.contributorNetherlands Cancer Institute-
Autor(es): dc.contributorUniversity of Mons-
Autor(es): dc.contributorRoyal Museum for Central Africa-
Autor(es): dc.contributorWashington State Department of Agriculture-
Autor(es): dc.contributorUniversity of New Mexico-
Autor(es): dc.contributorThe Pennsylvania State University-
Autor(es): dc.contributorUniversidade Federal de Minas Gerais (UFMG)-
Autor(es): dc.creatorFreitas, Felipe V-
Autor(es): dc.creatorBranstetter, Michael G-
Autor(es): dc.creatorFranceschini-Santos, Vinícius H-
Autor(es): dc.creatorDorchin, Achik-
Autor(es): dc.creatorWright, Karen W-
Autor(es): dc.creatorLópez-Uribe, Margarita M-
Autor(es): dc.creatorGriswold, Terry-
Autor(es): dc.creatorSilveira, Fernando A-
Autor(es): dc.creatorAlmeida, Eduardo A. B-
Data de aceite: dc.date.accessioned2025-08-21T21:43:32Z-
Data de disponibilização: dc.date.available2025-08-21T21:43:32Z-
Data de envio: dc.date.issued2025-04-29-
Data de envio: dc.date.issued2023-07-01-
Fonte completa do material: dc.identifierhttp://dx.doi.org/10.1093/isd/ixad012-
Fonte completa do material: dc.identifierhttps://hdl.handle.net/11449/303376-
Fonte: dc.identifier.urihttp://educapes.capes.gov.br/handle/11449/303376-
Descrição: dc.descriptionLong-horned bees (Apidae, Eucerini) are found in different biomes worldwide and include some important crop pollinators. In the Western Hemisphere, Eucerini received extensive taxonomic study during the twentieth century, resulting in several revisions of its genera. In contrast, progress on eucerine phylogenetic research and the genus-level classification has been slow, primarily due to the relatively homogeneous external morphology within the tribe and the rarity of many of its species in collections. Here, we present a comprehensive phylogenetic study of Eucerini based on ultraconserved elements, including 153 species from nearly all genera and subgenera and from all biogeographic regions where they occur. Many of these specimens are from museums and were collected as far back as 1909. We discuss the challenges of working with specimens with highly degraded DNA, present insights into improving phylogenetic results for both species-tree and concatenation approaches, and present a new pipeline for UCE curation (Curation of UltraconseRved Elements - CURE). Our results show the existence of seven main lineages in Eucerini and most of the genera and subgenera to be reciprocally monophyletic. Using a comprehensive and up-to-date phylogenetic framework, we: (1) propose taxonomic changes, including a new subtribal classification and reorganized generic and subgeneric limits; (2) estimate divergence times; and (3) conduct a detailed exploration of historical biogeography of long-horned bees. We find that eucerine lineages expanded their range onto most continents only after their initial diversification in southern South America during the Eocene.-
Descrição: dc.descriptionLaboratório de Biologia Comparada e Abelhas (LBCA) Departamento de Biologia Faculdade de Filosofia Ciências e Letras Universidade de São Paulo, SP-
Descrição: dc.descriptionU.S. Department of Agriculture Agricultural Research Service (USDA-ARS) Pollinating Insects Research Unit Utah State University-
Descrição: dc.descriptionDepartamento de Ciências Biológicas Instituto de Biociências Letras e Ciências Exatas (IBILCE) Universidade Estadual Paulista 'Júlio de Mesquita Filho' (UNESP), São Jos do Rio Preto,SP-
Descrição: dc.descriptionDepartment of Entomology Washington State University-
Descrição: dc.descriptionDivision of Gene Regulation and Oncode Institute Netherlands Cancer Institute-
Descrição: dc.descriptionLaboratory of Zoology Research Institute for Biosciences University of Mons-
Descrição: dc.descriptionDepartment of Biology - Invertebrates Royal Museum for Central Africa-
Descrição: dc.descriptionPlant Protection Division Washington State Department of Agriculture-
Descrição: dc.descriptionSevilleta Long-Term Ecological Research University of New Mexico-
Descrição: dc.descriptionDepartment of Entomology The Pennsylvania State University-
Descrição: dc.descriptionLaboratório de Sistemática de Insetos Departamento de Zoologia Universidade Federal de Minas Gerais, MG-
Descrição: dc.descriptionDepartamento de Ciências Biológicas Instituto de Biociências Letras e Ciências Exatas (IBILCE) Universidade Estadual Paulista 'Júlio de Mesquita Filho' (UNESP), São Jos do Rio Preto,SP-
Idioma: dc.languageen-
Relação: dc.relationInsect Systematics and Diversity-
???dc.source???: dc.sourceScopus-
Palavras-chave: dc.subjectCURE-
Palavras-chave: dc.subjectddBD-
Palavras-chave: dc.subjectMCMCtree-
Palavras-chave: dc.subjectmuseomics-
Palavras-chave: dc.subjectUCE curation-
Título: dc.titleUCE phylogenomics, biogeography, and classification of long-horned bees (Hymenoptera: Apidae: Eucerini), with insights on using specimens with extremely degraded DNA-
Tipo de arquivo: dc.typelivro digital-
Aparece nas coleções:Repositório Institucional - Unesp

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