Comparative Transcriptome Profiling of Maytenus ilicifolia Root and Leaf

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MetadadosDescriçãoIdioma
Autor(es): dc.contributorUniversidade Estadual Paulista (UNESP)-
Autor(es): dc.contributorVIB Center for Plant Systems Biology-
Autor(es): dc.creatorSantoni, Mariana Marchi-
Autor(es): dc.creatorde Lima, João Vítor Félix-
Autor(es): dc.creatorBicalho, Keylla Utherdyany-
Autor(es): dc.creatorde Souza Moreira, Tatiana Maria-
Autor(es): dc.creatorValentini, Sandro Roberto-
Autor(es): dc.creatorFurlan, Maysa-
Autor(es): dc.creatorZanelli, Cleslei Fernando-
Data de aceite: dc.date.accessioned2025-08-21T19:16:57Z-
Data de disponibilização: dc.date.available2025-08-21T19:16:57Z-
Data de envio: dc.date.issued2022-04-29-
Data de envio: dc.date.issued2022-04-29-
Data de envio: dc.date.issued2020-12-31-
Fonte completa do material: dc.identifierhttp://dx.doi.org/10.1007/978-3-030-91814-9_1-
Fonte completa do material: dc.identifierhttp://hdl.handle.net/11449/230109-
Fonte: dc.identifier.urihttp://educapes.capes.gov.br/handle/11449/230109-
Descrição: dc.descriptionPlants produce a wide variety of compounds called secondary metabolites (SMs), which are extremely important for their survival. SMs have also medicinal applications, but as chemical synthesis is not economically viable, plant extraction is the mainly option. Different biotechnology strategies are applied to improve the yield of bioproduction of these compounds, but commonly without the desired results due the limited knowledge of biosynthetic and regulatory pathways. Maytenus ilicifolia, a traditional Brazilian medicinal plant from Celastraceae family, produces in both root and leaves three main classes of SMs: sesquiterpenics, flavonoids and quinonemethides. In this study, four cDNA libraries were prepared from root and leaf tissues. The de novo transcriptome included 109,982 sequences that capture 92% of BUSCO orthologs, presented an average length of 737bp and a GC content about 42% of. Function annotation analysis identified homology for 44.8% of the transcripts. Moreover, 67,625 sequences were commonly expressed in both tissues, while 1,044 and 1,171 were differentially expressed in root and leaf, respectively. In terms of SM, enzymes involved in “monoterpenoid biosynthesis” and “isoflavonoid biosynthesis were identified in root while “flavonoid biosynthesis” and “Biosynthesis of alkaloids” in leaf.-
Descrição: dc.descriptionDepartment of Biological Sciences School of Pharmaceutical Sciences São Paulo State University (UNESP), SP-
Descrição: dc.descriptionVIB Center for Plant Systems Biology-
Descrição: dc.descriptionDepartment of Organic Chemistry Institute of Chemistry São Paulo State University (UNESP), SP-
Descrição: dc.descriptionDepartment of Biological Sciences School of Pharmaceutical Sciences São Paulo State University (UNESP), SP-
Descrição: dc.descriptionDepartment of Organic Chemistry Institute of Chemistry São Paulo State University (UNESP), SP-
Formato: dc.format3-14-
Idioma: dc.languageen-
Relação: dc.relationLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)-
???dc.source???: dc.sourceScopus-
Palavras-chave: dc.subjectDe novo assembly-
Palavras-chave: dc.subjectMetabolic pathways-
Palavras-chave: dc.subjectRNA-Seq-
Título: dc.titleComparative Transcriptome Profiling of Maytenus ilicifolia Root and Leaf-
Tipo de arquivo: dc.typeaula digital-
Aparece nas coleções:Repositório Institucional - Unesp

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