Complete Chromosome-scale genome sequence resource for sporisorium panici-leucophaei, the causal agent of sourgrass smut disease

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Autor(es): dc.contributorUniversidade de São Paulo (USP)-
Autor(es): dc.contributorMendelics Análise Genômica S.A.-
Autor(es): dc.contributorUniversidade Estadual Paulista (Unesp)-
Autor(es): dc.contributorSENAI Innovation Institute in Biomass-
Autor(es): dc.creatorCrestana, Gustavo Schiavone-
Autor(es): dc.creatorTaniguti, Lucas Mitsuo-
Autor(es): dc.creatorDos Santos, Clesivan Pereira-
Autor(es): dc.creatorBenevenuto, Juliana-
Autor(es): dc.creatorCeresini, Paulo Cezar [UNESP]-
Autor(es): dc.creatorCarvalho, Giselle-
Autor(es): dc.creatorKitajima, João Paulo-
Autor(es): dc.creatorMonteiro-Vitorello, Claudia Barros-
Data de aceite: dc.date.accessioned2022-02-22T00:53:51Z-
Data de disponibilização: dc.date.available2022-02-22T00:53:51Z-
Data de envio: dc.date.issued2021-06-25-
Data de envio: dc.date.issued2021-06-25-
Data de envio: dc.date.issued2021-04-01-
Fonte completa do material: dc.identifierhttp://dx.doi.org/10.1094/MPMI-08-20-0218-A-
Fonte completa do material: dc.identifierhttp://hdl.handle.net/11449/208593-
Fonte: dc.identifier.urihttp://educapes.capes.gov.br/handle/11449/208593-
Descrição: dc.descriptionHere, we present the first complete chromosome-level genome assembly of the smut fungus strain Sporisorium panici-leucophaei SPL10A, the causal agent of the sourgrass (Digitaria insularis) smut disease. Combining Illumina paired-end and Nanopore long reads, we generated a final assembly composed of 23 chromosomes (22 nuclear and one mitochondrial) with 18,915,934 bp. Gene prediction accomplished using extrinsic evidence from the sugarcane smut fungus Sporisorium scitamineum originated a total of 6,402 protein-encoding genes. The secretome (388 proteins) and the effectorome repertoires (68 candidates) were also predicted, given their crucial roles in plant-pathogen interactions. The complete telomere-to-telomere chromosome sequences of this poorly studied fungus will provide a valuable resource for future comparative genomic studies among smuts to unravel their underlying pathogenicity mechanisms.-
Descrição: dc.descriptionGenomics Group Department of Genetics University of São Paulo/Luiz de Queiroz College of Agriculture (USP/ESALQ)-
Descrição: dc.descriptionMendelics Análise Genômica S.A.-
Descrição: dc.descriptionMolecular Phytopathology Lab Plant Health Rural Engineering and Soils Department São Paulo State University (UNESP)-
Descrição: dc.descriptionSENAI Innovation Institute in Biomass-
Descrição: dc.descriptionMolecular Phytopathology Lab Plant Health Rural Engineering and Soils Department São Paulo State University (UNESP)-
Formato: dc.format448-452-
Idioma: dc.languageen-
Relação: dc.relationMolecular Plant-Microbe Interactions-
???dc.source???: dc.sourceScopus-
Palavras-chave: dc.subjectGenome assembly-
Palavras-chave: dc.subjectNanopore sequencing-
Palavras-chave: dc.subjectPlant-pathogen interaction-
Palavras-chave: dc.subjectSmut fungi-
Palavras-chave: dc.subjectSporisorium scitamineum-
Título: dc.titleComplete Chromosome-scale genome sequence resource for sporisorium panici-leucophaei, the causal agent of sourgrass smut disease-
Aparece nas coleções:Repositório Institucional - Unesp

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