A coffee berry borer (Hypothenemus hampei) genome assembly reveals a reduced chemosensory receptor gene repertoire and male-specific genome sequences

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Autor(es): dc.contributorNational Coffee Research Center-CENICAFE-
Autor(es): dc.contributorUniversidade Estadual Paulista (Unesp)-
Autor(es): dc.contributorManaaki Whenua–Landcare Research-
Autor(es): dc.contributorPennsylvania State University-
Autor(es): dc.contributorDuke University-
Autor(es): dc.contributorUniversidad Católica de Manizales-
Autor(es): dc.contributorPurdue University-
Autor(es): dc.creatorNavarro-Escalante, Lucio-
Autor(es): dc.creatorHernandez-Hernandez, Erick M. [UNESP]-
Autor(es): dc.creatorNuñez, Jonathan-
Autor(es): dc.creatorAcevedo, Flor E.-
Autor(es): dc.creatorBerrio, Alejandro-
Autor(es): dc.creatorConstantino, Luis M.-
Autor(es): dc.creatorPadilla-Hurtado, Beatriz E.-
Autor(es): dc.creatorMolina, Diana-
Autor(es): dc.creatorGongora, Carmenza-
Autor(es): dc.creatorAcuña, Ricardo-
Autor(es): dc.creatorStuart, Jeff-
Autor(es): dc.creatorBenavides, Pablo-
Data de aceite: dc.date.accessioned2022-02-22T00:45:51Z-
Data de disponibilização: dc.date.available2022-02-22T00:45:51Z-
Data de envio: dc.date.issued2021-06-25-
Data de envio: dc.date.issued2021-06-25-
Data de envio: dc.date.issued2021-11-30-
Fonte completa do material: dc.identifierhttp://dx.doi.org/10.1038/s41598-021-84068-1-
Fonte completa do material: dc.identifierhttp://hdl.handle.net/11449/205982-
Fonte: dc.identifier.urihttp://educapes.capes.gov.br/handle/11449/205982-
Descrição: dc.descriptionCoffee berry borer—CBB (Hypothenemus hampei) is a globally important economic pest of coffee (Coffea spp.). Despite current insect control methods for managing CBB, development of future control strategies requires a better understanding of its biology and interaction with its host plant. Towards this objective, we performed de novo CBB genome and transcriptome sequencing, improved CBB genome assembly and predicted 18,765 protein-encoding genes. Using genome and transcriptome data, we annotated the genes associated with chemosensation and found a reduced gene repertoire composed by 67 odorant receptors (ORs), 62 gustatory receptors (GRs), 33 ionotropic receptors (IRs) and 29 odorant-binding proteins (OBPs). In silico transcript abundance analysis of these chemosensory genes revealed expression enrichment in CBB adults compared with larva. Detection of differentially expressed chemosensory genes between males and females is likely associated with differences in host-finding behavior between sexes. Additionally, we discovered male-specific genome content and identified candidate male-specific expressed genes on these scaffolds, suggesting that a Y-like chromosome may be involved in the CBB’s functional haplodiploid mechanism of sex determination.-
Descrição: dc.descriptionNational Coffee Research Center-CENICAFE-
Descrição: dc.descriptionEstadual Paulista UNESP-Univ-
Descrição: dc.descriptionManaaki Whenua–Landcare Research, PO Box 69040-
Descrição: dc.descriptionDepartment of Entomology Pennsylvania State University-
Descrição: dc.descriptionDepartment of Biology Duke University-
Descrição: dc.descriptionInstituto de Investigación en Microbiología Y Biotecnología Agroindustrial Universidad Católica de Manizales-
Descrição: dc.descriptionDepartment of Entomology Purdue University-
Descrição: dc.descriptionEstadual Paulista UNESP-Univ-
Idioma: dc.languageen-
Relação: dc.relationScientific Reports-
???dc.source???: dc.sourceScopus-
Título: dc.titleA coffee berry borer (Hypothenemus hampei) genome assembly reveals a reduced chemosensory receptor gene repertoire and male-specific genome sequences-
Tipo de arquivo: dc.typelivro digital-
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